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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918609.1_cds_XP_016468033.1_60717
CDS Infomation

[gene=LOC107790597] [db_xref=GeneID:107790597] [protein=uncharacterized protein LOC107790597 isoform X2] [protein_id=XP_016468033.1] [location=complement(join(17663..17911,18231..18536,18630..18891,19068..19219,19344..19602,19883..20028,20783..20964,21048..21239,21772..21888,21964..22144))] [gbkey=CDS]
Sequence

ATGCCAAGCCTTTCATTATGCTTTATCACAATTATTTTTCTACTTGGAAAGGTCCAAGGC
AGGCTTCTAAGGCTTAATTCTTCCAACCAATTGATCTCAGATGGAATCGATCATCGACTT
AACAATCAAGAATATGGACAACACTTGCTTTCATCAGGCAAAATATGTCAACAGTTATAT
GGAGAAAGACTGGTCTCAAGAGGAAGCAAGACTCTCTTTAATATTCTTGGCCCTGGCATT
TTTGGTGCCACTATTTTTCAAATCTTGAAGACTTTGCCCAGGATTGTCATGGTCATTGCA
TCTGGAGTTGCAGCAAGTAAAGAGAAAGCTCAGAATCAAATATCTTCAGGAATTAGCACT
ACAGTTGGAGCTACAGTTTTCAATCTTACTTTAATGTGGGGAATATGTGTGATATTTGGC
ACTAAAGACATGACAGAAAAATCAGCTGCAGCATCTTCTTCACCTTTCAAAAGTTTGAAG
GGCCTAAGTGAAACTGGGGTTACAATTGACCCAAAAACAAGTAAAACAGCTGGAATCATG
CTCCTTTCCTTGATCCCATTAGCACTAGTTCAGCCAGTCACTACTTTCAACTCATTCTTT
GCAAGGCGTATTCTAATTTTCATCACGCTTTTGGTATCAGTCATGCTTTTAATGTCATAC
TTTCTTTATCAGATTTTTGATCCTTGGATGCAAGAAAGAAGTTTAGAATATTCCAAATAT
GAGAATTTGCTAGCAGGATTTCTGCATCATGTACAGAGGCATGCAAGAGGGAAGCTCATT
AATGAAGAAGGACAACCTGATATTGATGTCATCAAAAGATTATTCCTAGAGACTGATAAA
GATGCCAACAAATGCCTAACACTAGCCGAATTGGAGAATCTAACACTTGATATTCAATCA
GGGAAAGTTAAGGTGGACAAAGATTATGCTATTACTAAGATATTGAATTCTTTTGATCAA
AACAACGACAAAATAATCGAAGAGGATGAGTTTGTCGAGGGATGCAAAAGATGGATAGAA
GAAGCAAAGCAGTTAGCTCAAAGTAATGATTCAAATTCTAAAAAGATTTTACACAAGGTT
GTTGAGCAATTTACTAAAAAACAAAGGGATGAAATTGCTGAGATTGAGCATATAATGGCA
AGAATTTTGAAGCATGTTCAAACCCAAGCATTAGAAGCTGAACACCTTGTCAATGATGAT
GGAAGCCCCAATACTGAACGGATTAAAGAAATCTTCCATCAGTATGACTTTGATGGGAAC
AACGTCATAACAAAACCTGAATTGGAAGAGCTAATAGGTTCAGTCAAGTTTGGAGAAGTT
GAAATCAATCGCGATGACTCAGTTAAGAAAGTGTTGAGGGATTTTGATAAAGATGGTAAT
AACATGATCGACGAACATGAATTTGTCCACGGGATGACAAAATGGCTCAATGAGGCTATT
AGTGTGACTAAATGCCCTGACAAGAAAAGGGCCATTGATGAATATGAGAAGATTAAGTGG
AGTGAAGTTGACAAGTTAGTCTATGAGGTGGAAAAGGATGGAGAAATCAACTATAAGTTG
TTGACATGGGCATTTAACAAATCTGTGCTTCAAGTTTTGTTGGGGATTGCAATACTGACA
TTGTGTGCAAAACCTCTTGTGATTAGTATAGAAGATTTATCAGATGCTATGGGGATGCCT
TCTTTCCTTATCCCTTTTGTTATGGTACCTCTAGCTCTAAATGCAAGAATGGCAATAGCA
GCAATATTTCCAGCAAGTCAGAAGAGTTCAAAAACTGCATCTTTGACATTCTCAGAGATT
TATGGAGGAGTGATCATGAACAATATCATGGGCATGACAACACTTTTGGCAGTGGTGTGC
ATAAAGGACCTAAGATGGGATTATTCAGCTGAAGTGCTAATAGTTTTGGTGGTTTGCTCT
GTAGTTGGACTTCTTGCATTTTTCAGCACTACATATCCACTTTGGACTTGCCTCTTAGCA
TTTTCTCTATACCCTTTCTCGGTGTTGCTCTTTTACCTTCTTGAATGTGTATTTGGATGG
GCCTAA

Peptide Sequence

PEP ID

XP_016468033.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107790597 isoform X2 [Nicotiana tabacum]
Sequence

MPSLSLCFITIIFLLGKVQGRLLRLNSSNQLISDGIDHRLNNQEYGQHLLSSGKICQQLY
GERLVSRGSKTLFNILGPGIFGATIFQILKTLPRIVMVIASGVAASKEKAQNQISSGIST
TVGATVFNLTLMWGICVIFGTKDMTEKSAAASSSPFKSLKGLSETGVTIDPKTSKTAGIM
LLSLIPLALVQPVTTFNSFFARRILIFITLLVSVMLLMSYFLYQIFDPWMQERSLEYSKY
ENLLAGFLHHVQRHARGKLINEEGQPDIDVIKRLFLETDKDANKCLTLAELENLTLDIQS
GKVKVDKDYAITKILNSFDQNNDKIIEEDEFVEGCKRWIEEAKQLAQSNDSNSKKILHKV
VEQFTKKQRDEIAEIEHIMARILKHVQTQALEAEHLVNDDGSPNTERIKEIFHQYDFDGN
NVITKPELEELIGSVKFGEVEINRDDSVKKVLRDFDKDGNNMIDEHEFVHGMTKWLNEAI
SVTKCPDKKRAIDEYEKIKWSEVDKLVYEVEKDGEINYKLLTWAFNKSVLQVLLGIAILT
LCAKPLVISIEDLSDAMGMPSFLIPFVMVPLALNARMAIAAIFPASQKSSKTASLTFSEI
YGGVIMNNIMGMTTLLAVVCIKDLRWDYSAEVLIVLVVCSVVGLLAFFSTTYPLWTCLLA
FSLYPFSVLLFYLLECVFGWA

Transcript Sequence

Gene sequence data has not been registered.